BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D08LP1|AL425117
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1453 1808 0.0
>3x_Contig1453
Length = 8444
Score = 1808 bits (903), Expect = 0.0
Identities = 924/939 (98%), Gaps = 1/939 (0%)
Strand = Plus / Minus
Query: 1 ggtctgttaaattccatttnattacagtcatctttgctaacgagtacatcccccatacaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 7666 ggtctgttaaattccattt-attacagtcatctttgctaacgagtacatcccccatacaa 7608
Query: 61 ttaataagcactatatcttcsttggcattttcctcctcctgtgtatcctcattgatttcc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 7607 ttaataagcactatatcttcgttggcattttcctcctcctgtgtatcctcattgatttcc 7548
Query: 121 tctttcgcttcctttgtcactctattaaccttccttcttctctttaaccttttatattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7547 tctttcgcttcctttgtcactctattaaccttccttcttctctttaaccttttatattta 7488
Query: 181 gtgttatactgaacatccaattttgtaaatacatcctttagttcaacaatatgttcatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7487 gtgttatactgaacatccaattttgtaaatacatcctttagttcaacaatatgttcatac 7428
Query: 241 ggagttccgtcagcttcatggattctgattgtsatggatccggtgaacacctgagtagga 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7427 ggagttccgtcagcttcatggattctgattgtcatggatccggtgaacacctgagtagga 7368
Query: 301 gatttgtcttgatcttgcaaatattccatagcactagaattgarattttcttttccaacg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7367 gatttgtcttgatcttgcaaatattccatagcactagaattgaaattttcttttccaacg 7308
Query: 361 attttacctaatcctaattcctgcatctgaacttgtctgatgcccatttcaactgccatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7307 attttacctaatcctaattcctgcatctgaacttgtctgatgcccatttcaactgccatt 7248
Query: 421 ctctttttgttaaatctttgcgttatgcggaatattggaacaccggatccgtatacccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7247 ctctttttgttaaatctttgcgttatgcggaatattggaacaccggatccgtatacccat 7188
Query: 481 tgcttgaagaaagtttcgagtctatttttgttcacacgttcacacactctctgaaaatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7187 tgcttgaagaaagtttcgagtctatttttgttcacacgttcacacactctctgaaaatgg 7128
Query: 541 gtactagacaatgagttattggtcaattcccctgacatagcttgtragtatatkkkgggc 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 7127 gtactagacaatgagttattggtcaattcccctgacatagcttgtaagtatattttgggc 7068
Query: 601 aatactcgggacataccgaatgacctttctgtttttgtcattcttctatcgagaataaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7067 aatactcgggacataccgaatgacctttctgtttttgtcattcttctatcgagaataaaa 7008
Query: 661 agcaccattggagcctttaattttatrarakkaatttcctttgatagagttgatataggt 720
|||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 7007 agcaccattggagcctttaattttataaaattaatttcctttgatagagttgatataggt 6948
Query: 721 aaagaagcagaatcaaaagtagttccgattggctgtttttcccaatcctgttcaactatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6947 aaagaagcagaatcaaaagtagttccgattggctgtttttcccaatcctgttcaactatg 6888
Query: 781 gcttccgatgccattttgatcctgaatttgtactcattgacacccatgagctttcgtatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6887 gcttccgatgccattttgatcctgaatttgtactcattgacacccatgagctttcgtatt 6828
Query: 841 awttgtwataccatgtatcccgccatgccaacaacgcaccataaatcattcaattctaga 900
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6827 aattgtaataccatgtatcccgccatgccaacaacgcaccataaatcattcaattctaga 6768
Query: 901 ggrgtgatgttaacgccagaccattggtttgctaaaccc 939
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 6767 ggagtgatgttaacgccagaccattggtttgctaaaccc 6729
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6457
Number of Sequences: 1807
Number of extensions: 6457
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)